Atomistry » Arsenic » PDB 4zt2-5hlo » 5cg7
Atomistry »
  Arsenic »
    PDB 4zt2-5hlo »
      5cg7 »

Arsenic in PDB 5cg7: Leishmania Siamensis Triosephosphate Isomerase

Enzymatic activity of Leishmania Siamensis Triosephosphate Isomerase

All present enzymatic activity of Leishmania Siamensis Triosephosphate Isomerase:
5.3.1.1;

Protein crystallography data

The structure of Leishmania Siamensis Triosephosphate Isomerase, PDB code: 5cg7 was solved by B.Kuaprasert, P.Riangrungroj, W.Pornthanakasem, J.Attarataya, P.Sirimontree, M.Mungthin, S.Leelayoova, W.Suginta, K.Choowongkomon, U.Leartsakulpanich, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 93.15 / 1.88
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 81.440, 76.450, 94.940, 90.00, 101.14, 90.00
R / Rfree (%) 16.8 / 19.6

Arsenic Binding Sites:

The binding sites of Arsenic atom in the Leishmania Siamensis Triosephosphate Isomerase (pdb code 5cg7). This binding sites where shown within 5.0 Angstroms radius around Arsenic atom.
In total 2 binding sites of Arsenic where determined in the Leishmania Siamensis Triosephosphate Isomerase, PDB code: 5cg7:
Jump to Arsenic binding site number: 1; 2;

Arsenic binding site 1 out of 2 in 5cg7

Go back to Arsenic Binding Sites List in 5cg7
Arsenic binding site 1 out of 2 in the Leishmania Siamensis Triosephosphate Isomerase


Mono view


Stereo pair view

A full contact list of Arsenic with other atoms in the As binding site number 1 of Leishmania Siamensis Triosephosphate Isomerase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:As57

b:22.1
occ:1.00
AS A:CAS57 0.0 22.1 1.0
CE1 A:CAS57 1.9 15.9 1.0
CE2 A:CAS57 2.0 17.0 1.0
SG A:CAS57 2.3 15.3 1.0
CB A:CAS57 3.0 14.9 1.0
CA A:CAS57 4.5 13.1 1.0
O A:HOH497 4.8 21.6 1.0
C A:CAS57 4.9 14.9 1.0
ND2 A:ASN30 4.9 12.0 1.0
CB A:ASN30 4.9 12.4 1.0
CG A:ASN30 4.9 12.7 1.0
O A:CAS57 5.0 15.5 1.0

Arsenic binding site 2 out of 2 in 5cg7

Go back to Arsenic Binding Sites List in 5cg7
Arsenic binding site 2 out of 2 in the Leishmania Siamensis Triosephosphate Isomerase


Mono view


Stereo pair view

A full contact list of Arsenic with other atoms in the As binding site number 2 of Leishmania Siamensis Triosephosphate Isomerase within 5.0Å range:
probe atom residue distance (Å) B Occ
B:As57

b:24.9
occ:1.00
AS B:CAS57 0.0 24.9 1.0
CE2 B:CAS57 1.9 16.4 1.0
CE1 B:CAS57 2.0 20.3 1.0
SG B:CAS57 2.2 16.4 1.0
CB B:CAS57 3.0 15.9 1.0
CA B:CAS57 4.5 14.1 1.0
O B:HOH619 4.6 21.4 1.0
CB B:ASN30 4.9 13.5 1.0
C B:CAS57 4.9 14.6 1.0
CG B:ASN30 5.0 14.8 1.0
ND2 B:ASN30 5.0 14.1 1.0

Reference:

B.Kuaprasert, P.Riangrungroj, W.Pornthanakasem, P.Sirimontree, J.Attarataya, M.Mungthin, S.Leelayoova, W.Suginta, K.Choowongkomon, U.Leartsakulpanich. Crystal Structure of Leishmania Siamensis Triosephosphate Isomerase at 1.88 Angstroms To Be Published.
Page generated: Sat Dec 12 01:46:23 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy