Atomistry » Arsenic » PDB 1q2o-1yhc » 1tr7
Atomistry »
  Arsenic »
    PDB 1q2o-1yhc »
      1tr7 »

Arsenic in PDB 1tr7: Fimh Adhesin Receptor Binding Domain From Uropathogenic E. Coli

Protein crystallography data

The structure of Fimh Adhesin Receptor Binding Domain From Uropathogenic E. Coli, PDB code: 1tr7 was solved by J.Bouckaert, J.Berglund, M.Schembri, E.De Genst, L.Cools, M.Wuhrer, C.S.Hung, J.Pinkner, R.Slattegard, A.Zavialov, D.Choudhury, S.Langermann, S.J.Hultgren, L.Wyns, P.Klemm, S.Oscarson, S.D.Knight, H.De Greve, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.10
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 134.100, 29.200, 93.300, 90.00, 92.20, 90.00
R / Rfree (%) 17 / 20

Arsenic Binding Sites:

The binding sites of Arsenic atom in the Fimh Adhesin Receptor Binding Domain From Uropathogenic E. Coli (pdb code 1tr7). This binding sites where shown within 5.0 Angstroms radius around Arsenic atom.
In total only one binding site of Arsenic was determined in the Fimh Adhesin Receptor Binding Domain From Uropathogenic E. Coli, PDB code: 1tr7:

Arsenic binding site 1 out of 1 in 1tr7

Go back to Arsenic Binding Sites List in 1tr7
Arsenic binding site 1 out of 1 in the Fimh Adhesin Receptor Binding Domain From Uropathogenic E. Coli


Mono view


Stereo pair view

A full contact list of Arsenic with other atoms in the As binding site number 1 of Fimh Adhesin Receptor Binding Domain From Uropathogenic E. Coli within 5.0Å range:
probe atom residue distance (Å) B Occ
A:As1200

b:43.5
occ:1.00
AS A:CAC1200 0.0 43.5 1.0
O1 A:CAC1200 1.8 46.1 1.0
O2 A:CAC1200 1.8 46.7 1.0
C1 A:CAC1200 2.0 47.8 1.0
C2 A:CAC1200 2.0 46.4 1.0
OG1 A:THR53 3.6 24.1 1.0
C A:THR51 3.8 21.8 1.0
O A:THR51 3.8 21.5 1.0
OD1 A:ASN136 4.1 28.4 1.0
N A:ILE52 4.1 22.6 1.0
O A:GLU50 4.2 23.3 1.0
CA A:THR51 4.3 22.1 1.0
C A:ILE52 4.4 22.8 1.0
CA A:ILE52 4.5 22.5 1.0
N A:THR53 4.5 22.7 1.0
C A:GLU50 4.7 22.8 1.0
O A:ILE52 4.7 22.2 1.0
N A:THR51 4.8 22.7 1.0
O A:PRO49 4.8 21.5 1.0
CB A:THR53 4.8 24.0 1.0
O A:HOH2706 4.8 21.4 1.0

Reference:

J.Bouckaert, J.Berglund, M.Schembri, E.De Genst, L.Cools, M.Wuhrer, C.S.Hung, J.Pinkner, R.Slattegard, A.Zavialov, D.Choudhury, S.Langermann, S.J.Hultgren, L.Wyns, P.Klemm, S.Oscarson, S.D.Knight, H.De Greve. Receptor Binding Studies Disclose A Novel Class of High-Affinity Inhibitors of the Escherichia Coli Fimh Adhesin Mol.Microbiol. V. 55 441 2005.
ISSN: ISSN 0950-382X
PubMed: 15659162
DOI: 10.1111/J.1365-2958.2004.04415.X
Page generated: Tue Oct 27 16:47:29 2020

Last articles

Xe in 6AYK
Xe in 6QII
Xe in 6ASM
Xe in 5NSW
Xe in 6FY9
Xe in 5O1K
Xe in 5O27
Xe in 5M69
Xe in 5KPU
Xe in 5I63
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy