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Arsenic in PDB 2hmh: Crystal Structure of SOCS3 in Complex with GP130(PTYR757) Phosphopeptide.

Protein crystallography data

The structure of Crystal Structure of SOCS3 in Complex with GP130(PTYR757) Phosphopeptide., PDB code: 2hmh was solved by E.Bergamin, J.Wu, S.R.Hubbard, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.35 / 2.00
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 42.918, 94.708, 69.922, 90.00, 90.00, 90.00
R / Rfree (%) 24.2 / 29.1

Arsenic Binding Sites:

The binding sites of Arsenic atom in the Crystal Structure of SOCS3 in Complex with GP130(PTYR757) Phosphopeptide. (pdb code 2hmh). This binding sites where shown within 5.0 Angstroms radius around Arsenic atom.
In total 2 binding sites of Arsenic where determined in the Crystal Structure of SOCS3 in Complex with GP130(PTYR757) Phosphopeptide., PDB code: 2hmh:
Jump to Arsenic binding site number: 1; 2;

Arsenic binding site 1 out of 2 in 2hmh

Go back to Arsenic Binding Sites List in 2hmh
Arsenic binding site 1 out of 2 in the Crystal Structure of SOCS3 in Complex with GP130(PTYR757) Phosphopeptide.


Mono view


Stereo pair view

A full contact list of Arsenic with other atoms in the As binding site number 1 of Crystal Structure of SOCS3 in Complex with GP130(PTYR757) Phosphopeptide. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:As97

b:49.8
occ:1.00
AS A:CAS97 0.0 49.8 1.0
SG A:CAS97 2.2 33.5 1.0
CE2 A:PHE102 3.2 25.5 1.0
CB A:CAS97 3.3 29.2 1.0
CD2 A:PHE102 3.7 25.3 1.0
CZ A:PHE102 3.8 23.9 1.0
CE1 A:PHE80 4.2 23.8 1.0
CA A:CAS97 4.2 28.3 1.0
CG2 A:VAL38 4.3 37.5 1.0
CB A:ALA37 4.3 39.9 1.0
CD1 A:PHE80 4.3 23.4 1.0
N A:VAL38 4.6 38.9 1.0
CG A:PHE102 4.7 22.9 1.0
CE1 A:PHE102 4.8 23.2 1.0
O A:CAS97 4.8 29.4 1.0
C A:ALA37 4.9 39.4 1.0

Arsenic binding site 2 out of 2 in 2hmh

Go back to Arsenic Binding Sites List in 2hmh
Arsenic binding site 2 out of 2 in the Crystal Structure of SOCS3 in Complex with GP130(PTYR757) Phosphopeptide.


Mono view


Stereo pair view

A full contact list of Arsenic with other atoms in the As binding site number 2 of Crystal Structure of SOCS3 in Complex with GP130(PTYR757) Phosphopeptide. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:As119

b:35.6
occ:0.50
AS A:CAS119 0.0 35.6 0.5
CE1 A:CAS119 2.0 33.8 0.5
CE2 A:CAS119 2.0 31.7 0.5
SG A:CAS119 2.2 29.8 1.0
CB A:CAS119 2.9 25.4 1.0
CA A:CAS119 4.4 24.1 1.0
CB A:LEU121 5.0 19.0 1.0

Reference:

E.Bergamin, J.Wu, S.R.Hubbard. Structural Basis For Phosphotyrosine Recognition By Suppressor of Cytokine Signaling-3. Structure V. 14 1285 2006.
ISSN: ISSN 0969-2126
PubMed: 16905102
DOI: 10.1016/J.STR.2006.06.011
Page generated: Tue Oct 27 16:48:54 2020

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