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Arsenic in PDB 2rl7: Crystal Structure Cation-Dependent Mannose 6-Phosphate Receptor at pH 4.8

Protein crystallography data

The structure of Crystal Structure Cation-Dependent Mannose 6-Phosphate Receptor at pH 4.8, PDB code: 2rl7 was solved by L.J.Olson, O.Hindsgaul, J.-J.P.Kim, N.M.Dahms, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.67 / 2.00
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 50.840, 123.028, 53.092, 90.00, 92.46, 90.00
R / Rfree (%) 21.1 / 25.7

Arsenic Binding Sites:

The binding sites of Arsenic atom in the Crystal Structure Cation-Dependent Mannose 6-Phosphate Receptor at pH 4.8 (pdb code 2rl7). This binding sites where shown within 5.0 Angstroms radius around Arsenic atom.
In total only one binding site of Arsenic was determined in the Crystal Structure Cation-Dependent Mannose 6-Phosphate Receptor at pH 4.8, PDB code: 2rl7:

Arsenic binding site 1 out of 1 in 2rl7

Go back to Arsenic Binding Sites List in 2rl7
Arsenic binding site 1 out of 1 in the Crystal Structure Cation-Dependent Mannose 6-Phosphate Receptor at pH 4.8


Mono view


Stereo pair view

A full contact list of Arsenic with other atoms in the As binding site number 1 of Crystal Structure Cation-Dependent Mannose 6-Phosphate Receptor at pH 4.8 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:As317

b:45.5
occ:1.00
AS B:CAC317 0.0 45.5 1.0
O2 B:CAC317 1.8 46.9 1.0
OD2 B:ASP126 3.1 26.6 1.0
OD1 B:ASP126 3.5 21.3 1.0
CG B:ASP126 3.6 21.9 1.0
O B:HOH4346 4.0 30.3 1.0
O B:HOH4175 4.6 67.0 1.0
CH3 B:ACT319 4.9 29.1 1.0
CB B:ASP126 5.0 16.5 1.0

Reference:

L.J.Olson, O.Hindsgaul, N.M.Dahms, J.J.Kim. Structural Insights Into the Mechanism of pH-Dependent Ligand Binding and Release By the Cation-Dependent Mannose 6-Phosphate Receptor. J.Biol.Chem. V. 283 10124 2008.
ISSN: ISSN 0021-9258
PubMed: 18272523
DOI: 10.1074/JBC.M708994200
Page generated: Tue Oct 27 16:49:18 2020

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