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Arsenic in PDB 3f7d: Sf-1 Lbd Bound By Phosphatidylcholine

Protein crystallography data

The structure of Sf-1 Lbd Bound By Phosphatidylcholine, PDB code: 3f7d was solved by E.P.Sablin, R.J.Fletterick, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 23.76 / 2.20
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 46.895, 67.228, 82.689, 90.00, 90.00, 90.00
R / Rfree (%) 18 / 24.1

Arsenic Binding Sites:

The binding sites of Arsenic atom in the Sf-1 Lbd Bound By Phosphatidylcholine (pdb code 3f7d). This binding sites where shown within 5.0 Angstroms radius around Arsenic atom.
In total only one binding site of Arsenic was determined in the Sf-1 Lbd Bound By Phosphatidylcholine, PDB code: 3f7d:

Arsenic binding site 1 out of 1 in 3f7d

Go back to Arsenic Binding Sites List in 3f7d
Arsenic binding site 1 out of 1 in the Sf-1 Lbd Bound By Phosphatidylcholine


Mono view


Stereo pair view

A full contact list of Arsenic with other atoms in the As binding site number 1 of Sf-1 Lbd Bound By Phosphatidylcholine within 5.0Å range:
probe atom residue distance (Å) B Occ
A:As267

b:0.9
occ:1.00
AS A:CAF267 0.0 0.9 1.0
O1 A:CAF267 1.8 0.6 1.0
CE1 A:CAF267 1.9 0.6 1.0
CE2 A:CAF267 2.0 0.6 1.0
SG A:CAF267 2.1 45.0 1.0
CB A:CAF267 3.3 31.6 1.0
CA A:CAF267 3.9 27.2 1.0
CD2 A:LEU438 4.1 26.2 1.0
O A:CAF267 4.1 29.9 1.0
C A:CAF267 4.4 24.9 1.0
CZ A:PHE263 4.4 34.2 1.0
CD1 A:ILE454 4.6 48.6 1.0
CE2 A:PHE263 4.8 39.3 1.0
CD1 A:LEU443 4.9 41.5 1.0
ND2 A:ASN451 4.9 37.3 1.0
CB A:LEU453 4.9 34.6 1.0
OD1 A:ASN451 5.0 51.9 1.0

Reference:

E.P.Sablin, R.D.Blind, I.N.Krylova, J.G.Ingraham, F.Cai, J.D.Williams, R.J.Fletterick, H.A.Ingraham. Structure of Sf-1 Bound By Different Phospholipids: Evidence For Regulatory Ligands. Mol.Endocrinol. V. 23 25 2009.
ISSN: ISSN 0888-8809
PubMed: 18988706
DOI: 10.1210/ME.2007-0508
Page generated: Tue Oct 27 16:50:03 2020

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