The binding sites of Arsenic atom in the structure of Crystal Structure of GCN5-Related N-Acetyltransferase-Like Protein (ZP_00874857) (ZP_00874857.1) From Streptococcus Suis 89/1591 At 1.80 A Resolution (pdb code 3g3s). This binding sites where shown with 5.0 Angstroms radius around Arsenic atom.
The 3g3s structure was solved by JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG), with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
| Resolution (A) | 29.3-1.8 | | Space group | P212121 | | a (A) | 71.395 | | b (A) | 83.880 | | c (A) | 93.763 | | alpha (°) | 90.00 | | beta (°) | 90.00 | | gamma (°) | 90.00 | | Rfactor (%) | 20.3 | | Rfree (%) | 23.9 |
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Arsenic binding site 1 out of 1 in 3g3s
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Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Arsenic in the PDB 3g3s. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Arsenic atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Ile186, A: Glu187, A: Val188, A: Trp220, A: Asp221, A: Ala222, A: His223, A: Ser227, A: Cac250, A: Edo252, A: Hoh259, A: Hoh290, A: Hoh309, A: Hoh314, A: Hoh501, | conact list:
| Atom | Atom | Distance (A) | | As | O A:Ile186 | 4.04 | | As | C A:Ile186 | 4.95 | | As | CA A:Glu187 | 4.87 | | As | N A:Val188 | 4.68 | | As | CD1 A:Trp220 | 4.93 | | As | CZ2 A:Trp220 | 4.71 | | As | CE2 A:Trp220 | 4.56 | | As | NE1 A:Trp220 | 4.39 | | As | O A:Asp221 | 3.56 | | As | C A:Asp221 | 4.53 | | As | CA A:Ala222 | 4.65 | | As | N A:His223 | 4.35 | | As | CB A:His223 | 4.83 | | As | CB A:Ser227 | 4.75 | | As | OG A:Ser227 | 3.77 | | As | O1 A:Cac250 | 1.78 | | As | O2 A:Cac250 | 1.74 | | As | AS A:Cac250 | 0.00 | | As | C2 A:Cac250 | 1.98 | | As | C1 A:Cac250 | 1.97 | | As | O1 A:Edo252 | 4.06 | | As | O2 A:Edo252 | 4.28 | | As | O A:Hoh259 | 4.25 | | As | O A:Hoh290 | 3.76 | | As | O A:Hoh309 | 4.50 | | As | O A:Hoh314 | 4.02 | | As | O A:Hoh501 | 4.82 |
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