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Arsenic in PDB 3kp6: Staphylococcus Epidermidis Tcar in Complex with Salicylate

Protein crystallography data

The structure of Staphylococcus Epidermidis Tcar in Complex with Salicylate, PDB code: 3kp6 was solved by Y.M.Chang, C.K.Chen, Y.J.Yeh, A.H.Wang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 2.45
Space group P 61
Cell size a, b, c (Å), α, β, γ (°) 105.381, 105.381, 51.963, 90.00, 90.00, 120.00
R / Rfree (%) 23.4 / 27.1

Arsenic Binding Sites:

The binding sites of Arsenic atom in the Staphylococcus Epidermidis Tcar in Complex with Salicylate (pdb code 3kp6). This binding sites where shown within 5.0 Angstroms radius around Arsenic atom.
In total only one binding site of Arsenic was determined in the Staphylococcus Epidermidis Tcar in Complex with Salicylate, PDB code: 3kp6:

Arsenic binding site 1 out of 1 in 3kp6

Go back to Arsenic Binding Sites List in 3kp6
Arsenic binding site 1 out of 1 in the Staphylococcus Epidermidis Tcar in Complex with Salicylate


Mono view


Stereo pair view

A full contact list of Arsenic with other atoms in the As binding site number 1 of Staphylococcus Epidermidis Tcar in Complex with Salicylate within 5.0Å range:
probe atom residue distance (Å) B Occ
B:As2001

b:91.3
occ:1.00
AS B:CAC2001 0.0 91.3 1.0
O2 B:CAC2001 1.8 90.8 1.0
O1 B:CAC2001 2.0 89.6 1.0
C2 B:CAC2001 2.1 89.1 1.0
C1 B:CAC2001 2.1 89.7 1.0
OG B:SER37 3.2 43.9 1.0
NH1 B:ARG70 3.5 71.1 1.0
NZ B:LYS74 3.7 53.0 1.0
NE2 B:GLN40 3.7 50.0 1.0
NE B:ARG71 3.8 58.4 1.0
CB B:SER37 4.1 47.5 1.0
NH2 B:ARG71 4.2 59.6 1.0
CD B:LYS74 4.3 50.3 1.0
CG B:GLU39 4.4 56.1 1.0
CZ B:ARG71 4.4 58.9 1.0
CG B:GLN40 4.4 50.0 1.0
CD B:GLN40 4.4 50.5 1.0
CE B:LYS74 4.5 51.6 1.0
CD B:ARG71 4.7 57.5 1.0
CZ B:ARG70 4.8 71.7 1.0
CG B:ARG71 4.8 56.8 1.0
O B:HOH1076 4.9 78.2 1.0

Reference:

Y.M.Chang, W.Y.Jeng, T.P.Ko, Y.J.Yeh, C.K.Chen, A.H.Wang. Structural Study of Tcar and Its Complexes with Multiple Antibiotics From Staphylococcus Epidermidis. Proc.Natl.Acad.Sci.Usa V. 107 8617 2010.
ISSN: ISSN 0027-8424
PubMed: 20421503
DOI: 10.1073/PNAS.0913302107
Page generated: Sat Dec 12 01:40:46 2020

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