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Arsenic in PDB 3n5f: Crystal Structure of L-N-Carbamoylase From Geobacillus Stearothermophilus CECT43

Enzymatic activity of Crystal Structure of L-N-Carbamoylase From Geobacillus Stearothermophilus CECT43

All present enzymatic activity of Crystal Structure of L-N-Carbamoylase From Geobacillus Stearothermophilus CECT43:
3.5.1.87;

Protein crystallography data

The structure of Crystal Structure of L-N-Carbamoylase From Geobacillus Stearothermophilus CECT43, PDB code: 3n5f was solved by A.Garcia-Pino, S.Martinez-Rodriguez, J.A.Gavira, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.75
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 103.208, 211.683, 43.091, 90.00, 90.00, 90.00
R / Rfree (%) 19.3 / 27.6

Other elements in 3n5f:

The structure of Crystal Structure of L-N-Carbamoylase From Geobacillus Stearothermophilus CECT43 also contains other interesting chemical elements:

Cobalt (Co) 2 atoms

Arsenic Binding Sites:

The binding sites of Arsenic atom in the Crystal Structure of L-N-Carbamoylase From Geobacillus Stearothermophilus CECT43 (pdb code 3n5f). This binding sites where shown within 5.0 Angstroms radius around Arsenic atom.
In total only one binding site of Arsenic was determined in the Crystal Structure of L-N-Carbamoylase From Geobacillus Stearothermophilus CECT43, PDB code: 3n5f:

Arsenic binding site 1 out of 1 in 3n5f

Go back to Arsenic Binding Sites List in 3n5f
Arsenic binding site 1 out of 1 in the Crystal Structure of L-N-Carbamoylase From Geobacillus Stearothermophilus CECT43


Mono view


Stereo pair view

A full contact list of Arsenic with other atoms in the As binding site number 1 of Crystal Structure of L-N-Carbamoylase From Geobacillus Stearothermophilus CECT43 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:As410

b:0.2
occ:1.00
 AS B:CAC410 0.0 0.2 1.0
O2 B:CAC410 1.7 0.8 1.0
O1 B:CAC410 1.7 0.7 1.0
C2 B:CAC410 2.0 0.4 1.0
C1 B:CAC410 2.0 1.0 1.0
NE2 A:HIS225 4.1 6.2 1.0
N B:ALA355 4.3 9.3 1.0
CB B:ALA354 4.5 9.2 1.0
ND2 A:ASN273 4.6 8.8 1.0
O B:ALA355 4.6 9.2 1.0
CE1 A:HIS225 4.7 7.3 1.0
NH1 B:ARG286 4.7 2.0 1.0
CA B:ALA354 4.8 9.1 1.0
CB B:ALA355 4.9 9.2 1.0

Reference:

S.Martinez-Rodriguez, A.Garcia-Pino, F.J.Las Heras-Vazquez, J.M.Clemente-Jimenez, F.Rodriguez-Vico, J.M.Garcia-Ruiz, R.Loris, J.A.Gavira. Mutational and Structural Analysis of L-N-Carbamoylase Reveals New Insights Into A Peptidase M20/M25/M40 Family Member. J.Bacteriol. V. 194 5759 2012.
ISSN: ISSN 0021-9193
PubMed: 22904279
DOI: 10.1128/JB.01056-12
Page generated: Wed Jul 10 11:47:53 2024

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