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Arsenic in PDB 4jd0: Structure of the Inositol-1-Phosphate Ctp Transferase From T. Maritima.

Protein crystallography data

The structure of Structure of the Inositol-1-Phosphate Ctp Transferase From T. Maritima., PDB code: 4jd0 was solved by B.Stec, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 115.47 / 1.80
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 133.090, 133.090, 43.365, 90.00, 90.00, 120.00
R / Rfree (%) 11.1 / 16.6

Other elements in 4jd0:

The structure of Structure of the Inositol-1-Phosphate Ctp Transferase From T. Maritima. also contains other interesting chemical elements:

Chlorine (Cl) 1 atom
Sodium (Na) 8 atoms

Arsenic Binding Sites:

The binding sites of Arsenic atom in the Structure of the Inositol-1-Phosphate Ctp Transferase From T. Maritima. (pdb code 4jd0). This binding sites where shown within 5.0 Angstroms radius around Arsenic atom.
In total only one binding site of Arsenic was determined in the Structure of the Inositol-1-Phosphate Ctp Transferase From T. Maritima., PDB code: 4jd0:

Arsenic binding site 1 out of 1 in 4jd0

Go back to Arsenic Binding Sites List in 4jd0
Arsenic binding site 1 out of 1 in the Structure of the Inositol-1-Phosphate Ctp Transferase From T. Maritima.


Mono view


Stereo pair view

A full contact list of Arsenic with other atoms in the As binding site number 1 of Structure of the Inositol-1-Phosphate Ctp Transferase From T. Maritima. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:As301

b:44.2
occ:0.60
AS A:1KH301 0.0 44.2 0.6
NA A:NA303 1.5 18.3 0.4
O2P A:1KH301 1.7 40.0 0.6
C1P A:1KH301 1.7 24.2 0.6
O3P A:1KH301 1.7 25.8 0.6
O4P A:1KH301 1.8 20.9 0.6
CL A:CL302 2.1 34.9 0.4
C1 A:1KH301 2.7 29.1 0.6
OD2 A:ASP166 3.3 19.3 1.0
O A:HOH455 3.4 36.4 1.0
C4 A:1KH301 3.6 27.0 0.6
O5 A:1KH301 3.7 38.4 0.6
C2 A:1KH301 3.7 27.7 0.6
OD1 A:ASP166 3.7 16.4 1.0
O1 A:1KH301 3.7 23.8 0.6
CG A:ASP166 3.8 15.5 1.0
O A:HOH420 3.9 27.4 1.0
N A:TYR192 4.0 17.2 1.0
OG A:SER143 4.1 19.6 0.6
OG A:SER143 4.1 10.6 0.2
CB A:LEU191 4.1 26.0 1.0
C3 A:1KH301 4.2 28.7 0.6
CB A:TYR192 4.3 18.1 1.0
CD1 A:TYR192 4.4 22.4 1.0
O4 A:1KH301 4.4 28.2 0.6
CZ A:PHE170 4.4 16.4 1.0
CA A:TYR192 4.7 17.7 1.0
C A:LEU191 4.7 16.9 1.0
CA A:LEU191 4.8 19.6 1.0
N A:LEU191 4.8 19.4 1.0
CB A:SER143 4.8 13.3 0.2
CB A:SER143 4.8 17.2 0.2
CA A:GLY168 4.8 13.7 1.0
CG A:TYR192 4.9 17.8 1.0
CD1 A:LEU191 4.9 19.1 1.0
O2 A:1KH301 4.9 48.7 0.6
ND2 A:ASN85 5.0 28.5 0.6
CB A:SER143 5.0 20.2 0.6

Reference:

O.V.Kurnasov, H.J.Luk, M.F.Roberts, B.Stec. Structure of the Inositol-1-Phosphate Cytidylyltransferase From Thermotoga Maritima. Acta Crystallogr.,Sect.D V. 69 1808 2013.
ISSN: ISSN 0907-4449
PubMed: 23999304
DOI: 10.1107/S0907444913015278
Page generated: Wed Jul 10 12:12:58 2024

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