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Arsenic in PDB 4pcp: Crystal Structure of Phosphotriesterase Variant R0

Enzymatic activity of Crystal Structure of Phosphotriesterase Variant R0

All present enzymatic activity of Crystal Structure of Phosphotriesterase Variant R0:
3.1.8.1;

Protein crystallography data

The structure of Crystal Structure of Phosphotriesterase Variant R0, PDB code: 4pcp was solved by E.Campbell, M.Kaltenbach, N.Tokuriki, C.J.Jackson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.16 / 1.63
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 86.141, 86.325, 88.722, 90.00, 90.00, 90.00
R / Rfree (%) 17.9 / 21.9

Other elements in 4pcp:

The structure of Crystal Structure of Phosphotriesterase Variant R0 also contains other interesting chemical elements:

Zinc (Zn) 4 atoms

Arsenic Binding Sites:

The binding sites of Arsenic atom in the Crystal Structure of Phosphotriesterase Variant R0 (pdb code 4pcp). This binding sites where shown within 5.0 Angstroms radius around Arsenic atom.
In total 2 binding sites of Arsenic where determined in the Crystal Structure of Phosphotriesterase Variant R0, PDB code: 4pcp:
Jump to Arsenic binding site number: 1; 2;

Arsenic binding site 1 out of 2 in 4pcp

Go back to Arsenic Binding Sites List in 4pcp
Arsenic binding site 1 out of 2 in the Crystal Structure of Phosphotriesterase Variant R0


Mono view


Stereo pair view

A full contact list of Arsenic with other atoms in the As binding site number 1 of Crystal Structure of Phosphotriesterase Variant R0 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:As2403

b:30.9
occ:0.69
AS A:CAC2403 0.0 30.9 0.7
O1 A:CAC2403 1.7 29.1 0.7
O2 A:CAC2403 1.8 14.7 0.7
C2 A:CAC2403 2.0 35.4 0.7
C1 A:CAC2403 2.0 17.5 0.7
O A:HOH2649 3.2 24.3 1.0
ZN A:ZN2402 3.2 19.2 0.8
ZN A:ZN2401 3.3 11.4 0.8
OQ2 A:KCX169 3.6 16.2 1.0
NE1 A:TRP131 4.0 21.8 1.0
OQ1 A:KCX169 4.1 15.4 1.0
OD2 A:ASP301 4.1 17.9 1.0
CX A:KCX169 4.3 19.7 1.0
NE2 A:HIS57 4.3 12.8 1.0
CZ2 A:TRP131 4.3 24.7 1.0
OD1 A:ASP301 4.4 14.8 1.0
CE2 A:TRP131 4.4 20.9 1.0
ND1 A:HIS201 4.4 19.5 1.0
CE1 A:HIS201 4.6 28.4 1.0
NE2 A:HIS230 4.7 18.0 1.0
CG A:ASP301 4.7 14.1 1.0
CE1 A:HIS57 4.8 12.0 1.0

Arsenic binding site 2 out of 2 in 4pcp

Go back to Arsenic Binding Sites List in 4pcp
Arsenic binding site 2 out of 2 in the Crystal Structure of Phosphotriesterase Variant R0


Mono view


Stereo pair view

A full contact list of Arsenic with other atoms in the As binding site number 2 of Crystal Structure of Phosphotriesterase Variant R0 within 5.0Å range:
probe atom residue distance (Å) B Occ
G:As2403

b:28.3
occ:0.69
AS G:CAC2403 0.0 28.3 0.7
O2 G:CAC2403 1.7 15.5 0.7
O1 G:CAC2403 1.7 23.1 0.7
C2 G:CAC2403 2.0 26.2 0.7
C1 G:CAC2403 2.0 16.7 0.7
ZN G:ZN2402 3.2 19.2 0.9
O G:HOH2679 3.2 20.2 1.0
ZN G:ZN2401 3.3 16.5 1.0
OQ1 G:KCX169 3.5 20.0 1.0
NE1 G:TRP131 4.1 21.0 1.0
OQ2 G:KCX169 4.1 17.7 1.0
CX G:KCX169 4.2 22.2 1.0
OD2 G:ASP301 4.2 20.2 1.0
NE2 G:HIS57 4.2 13.4 1.0
CZ2 G:TRP131 4.2 24.1 1.0
CE2 G:TRP131 4.4 25.0 1.0
OD1 G:ASP301 4.5 18.5 1.0
ND1 G:HIS201 4.5 20.9 1.0
NE2 G:HIS230 4.6 20.6 1.0
CE1 G:HIS201 4.7 22.4 1.0
CE1 G:HIS57 4.7 17.9 1.0
CG G:ASP301 4.8 18.8 1.0

Reference:

E.Campbell, M.Kaltenbach, N.Tokuriki, C.Jackson. Crystal Structure of Phosphotriesterase Variant R0 To Be Published.
Page generated: Wed Jul 10 12:26:10 2024

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