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Arsenic in PDB 4piv: Human Fatty Acid Synthase Psi/Kr Tri-Domain with Nadph and GSK2194069

Enzymatic activity of Human Fatty Acid Synthase Psi/Kr Tri-Domain with Nadph and GSK2194069

All present enzymatic activity of Human Fatty Acid Synthase Psi/Kr Tri-Domain with Nadph and GSK2194069:
2.3.1.85;

Protein crystallography data

The structure of Human Fatty Acid Synthase Psi/Kr Tri-Domain with Nadph and GSK2194069, PDB code: 4piv was solved by S.P.Williams, L.Wang, K.K.Brown, C.A.Parrish, M.A.Hardwicke, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.55 / 2.30
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 48.221, 85.761, 85.995, 65.49, 89.96, 87.22
R / Rfree (%) 21.4 / 24.6

Arsenic Binding Sites:

The binding sites of Arsenic atom in the Human Fatty Acid Synthase Psi/Kr Tri-Domain with Nadph and GSK2194069 (pdb code 4piv). This binding sites where shown within 5.0 Angstroms radius around Arsenic atom.
In total 2 binding sites of Arsenic where determined in the Human Fatty Acid Synthase Psi/Kr Tri-Domain with Nadph and GSK2194069, PDB code: 4piv:
Jump to Arsenic binding site number: 1; 2;

Arsenic binding site 1 out of 2 in 4piv

Go back to Arsenic Binding Sites List in 4piv
Arsenic binding site 1 out of 2 in the Human Fatty Acid Synthase Psi/Kr Tri-Domain with Nadph and GSK2194069


Mono view


Stereo pair view

A full contact list of Arsenic with other atoms in the As binding site number 1 of Human Fatty Acid Synthase Psi/Kr Tri-Domain with Nadph and GSK2194069 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:As2201

b:38.8
occ:1.00
AS A:CAC2201 0.0 38.8 1.0
O2 A:CAC2201 1.7 41.0 1.0
C1 A:CAC2201 2.0 41.0 1.0
C2 A:CAC2201 2.0 38.7 1.0
SG A:CYS1881 2.1 33.7 1.0
CB A:CYS1881 3.2 33.3 1.0
CE2 A:TYR2015 3.5 32.3 1.0
CA A:CYS1881 3.7 33.2 1.0
CD2 A:TYR2015 3.9 31.9 1.0
CZ A:TYR2015 4.0 32.6 1.0
O A:PHE1880 4.1 31.3 1.0
CE2 A:TYR1887 4.2 30.1 1.0
N A:CYS1881 4.2 32.8 1.0
OH A:TYR2015 4.3 35.1 1.0
OH A:TYR1887 4.3 32.4 1.0
C A:PHE1880 4.4 32.8 1.0
CZ A:TYR1887 4.6 31.2 1.0
CD2 A:LEU1904 4.7 28.7 1.0
CD A:PRO1882 4.7 33.7 1.0
CG A:TYR2015 4.8 30.9 1.0
CE1 A:TYR2015 4.8 32.2 1.0
CD1 A:LEU2099 4.9 35.7 1.0
C A:CYS1881 5.0 33.7 1.0

Arsenic binding site 2 out of 2 in 4piv

Go back to Arsenic Binding Sites List in 4piv
Arsenic binding site 2 out of 2 in the Human Fatty Acid Synthase Psi/Kr Tri-Domain with Nadph and GSK2194069


Mono view


Stereo pair view

A full contact list of Arsenic with other atoms in the As binding site number 2 of Human Fatty Acid Synthase Psi/Kr Tri-Domain with Nadph and GSK2194069 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:As2201

b:40.4
occ:1.00
AS B:CAC2201 0.0 40.4 1.0
O2 B:CAC2201 1.7 44.2 1.0
C2 B:CAC2201 2.0 43.1 1.0
C1 B:CAC2201 2.0 39.8 1.0
SG B:CYS1881 2.1 34.4 1.0
CB B:CYS1881 3.2 34.2 1.0
CE2 B:TYR2015 3.5 33.4 1.0
CA B:CYS1881 3.6 35.0 1.0
CD2 B:TYR2015 3.9 32.7 1.0
O B:PHE1880 4.0 34.9 1.0
CZ B:TYR2015 4.0 33.6 1.0
N B:CYS1881 4.2 35.5 1.0
CE2 B:TYR1887 4.2 31.1 1.0
OH B:TYR1887 4.3 33.6 1.0
C B:PHE1880 4.3 35.7 1.0
OH B:TYR2015 4.3 34.5 1.0
CZ B:TYR1887 4.6 32.2 1.0
CD B:PRO1882 4.7 35.4 1.0
CG B:TYR2015 4.8 31.5 1.0
CD2 B:LEU1904 4.8 28.6 1.0
CE1 B:TYR2015 4.8 32.7 1.0
C B:CYS1881 4.9 35.5 1.0

Reference:

M.A.Hardwicke, A.R.Rendina, S.P.Williams, M.L.Moore, L.Wang, J.A.Krueger, R.N.Plant, R.D.Totoritis, G.Zhang, J.Briand, W.A.Burkhart, K.K.Brown, C.A.Parrish. A Human Fatty Acid Synthase Inhibitor Binds Beta-Ketoacyl Reductase in the Keto-Substrate Site. Nat.Chem.Biol. V. 10 774 2014.
ISSN: ESSN 1552-4469
PubMed: 25086508
DOI: 10.1038/NCHEMBIO.1603
Page generated: Wed Jul 10 12:26:18 2024

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