Atomistry » Arsenic » PDB 4uhf-4zng » 4w7u
Atomistry »
  Arsenic »
    PDB 4uhf-4zng »
      4w7u »

Arsenic in PDB 4w7u: Crystal Structure of XACCEL5A in the Native Form

Protein crystallography data

The structure of Crystal Structure of XACCEL5A in the Native Form, PDB code: 4w7u was solved by J.H.Paiva, M.T.Murakami, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.54 / 1.48
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 79.367, 81.730, 48.232, 90.00, 90.00, 90.00
R / Rfree (%) 14.4 / 19.3

Arsenic Binding Sites:

The binding sites of Arsenic atom in the Crystal Structure of XACCEL5A in the Native Form (pdb code 4w7u). This binding sites where shown within 5.0 Angstroms radius around Arsenic atom.
In total 2 binding sites of Arsenic where determined in the Crystal Structure of XACCEL5A in the Native Form, PDB code: 4w7u:
Jump to Arsenic binding site number: 1; 2;

Arsenic binding site 1 out of 2 in 4w7u

Go back to Arsenic Binding Sites List in 4w7u
Arsenic binding site 1 out of 2 in the Crystal Structure of XACCEL5A in the Native Form


Mono view


Stereo pair view

A full contact list of Arsenic with other atoms in the As binding site number 1 of Crystal Structure of XACCEL5A in the Native Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:As401

b:24.1
occ:0.50
AS A:CAC401 0.0 24.1 0.5
O1 A:CAC401 1.7 18.3 0.7
O2 A:CAC401 1.7 14.3 0.7
C1 A:CAC401 1.9 19.6 0.7
C2 A:CAC401 2.0 21.6 0.7
O A:HOH654 2.8 32.4 1.0
OE1 A:GLU246 3.1 15.0 1.0
OH A:TYR92 3.5 19.8 1.0
OE2 A:GLU246 3.7 14.1 1.0
C2 A:CAC402 3.8 23.2 0.5
CD A:GLU246 3.8 12.4 1.0
OE2 A:GLU134 3.9 18.1 1.0
OE1 A:GLU134 4.1 15.1 1.0
CD A:GLU134 4.2 13.0 1.0
ND2 A:ASN133 4.4 11.9 1.0
NE2 A:HIS90 4.4 13.8 1.0
CZ A:TYR92 4.5 16.1 1.0
CE1 A:TYR92 4.6 16.2 1.0
OH A:TYR206 4.6 14.5 1.0
CE1 A:HIS90 4.7 13.2 1.0
O2 A:CAC402 5.0 25.3 0.5

Arsenic binding site 2 out of 2 in 4w7u

Go back to Arsenic Binding Sites List in 4w7u
Arsenic binding site 2 out of 2 in the Crystal Structure of XACCEL5A in the Native Form


Mono view


Stereo pair view

A full contact list of Arsenic with other atoms in the As binding site number 2 of Crystal Structure of XACCEL5A in the Native Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:As402

b:29.4
occ:0.50
AS A:CAC402 0.0 29.4 0.5
O1 A:CAC402 1.7 24.6 0.5
O2 A:CAC402 1.7 25.3 0.5
C2 A:CAC402 1.9 23.2 0.5
C1 A:CAC402 2.0 25.4 0.5
OH A:TYR289 3.6 22.0 1.0
O A:GLY213 3.7 40.0 1.0
C1 A:CAC401 4.2 19.6 0.7
O A:SER212 4.4 29.2 1.0
C A:GLY213 4.5 26.1 1.0
NE1 A:TRP279 4.5 15.7 1.0
CZ A:TYR289 4.8 19.8 1.0
CD1 A:TRP279 4.8 15.8 1.0
C2 A:CAC401 4.8 21.6 0.7
CA A:GLY213 5.0 27.6 1.0
CE1 A:TYR289 5.0 20.5 1.0

Reference:

J.H.Paiva, M.T.Murakami. Crystal Structure of XACCEL5A in the Native Form To Be Published.
Page generated: Wed Jul 10 12:29:30 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy