Arsenic in PDB 5keo: Structure Determination of A Self-Assembling Dna Crystal

The structure of Structure Determination of A Self-Assembling Dna Crystal, PDB code: 5keo was solved by C.R.Simmons, J.J.Birktoft, N.C.Seeman, H.Yan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	41.61 / 3.15
Space group	P 32 2 1
Cell size a, b, c (Å), α, β, γ (°)	67.946, 67.946, 58.839, 90.00, 90.00, 120.00
R / Rfree (%)	23.2 / 27.5

The binding sites of Arsenic atom in the Structure Determination of A Self-Assembling Dna Crystal (pdb code 5keo). This binding sites where shown within 5.0 Angstroms radius around Arsenic atom.
In total 2 binding sites of Arsenic where determined in the Structure Determination of A Self-Assembling Dna Crystal, PDB code: 5keo:
Jump to Arsenic binding site number: 1; 2;

Arsenic binding site 1 out of 2 in the Structure Determination of A Self-Assembling Dna Crystal


Mono view


Stereo pair view

A full contact list of Arsenic with other atoms in the As binding site number 1 of Structure Determination of A Self-Assembling Dna Crystal within 5.0Å range:

Arsenic binding site 2 out of 2 in the Structure Determination of A Self-Assembling Dna Crystal


Mono view


Stereo pair view

A full contact list of Arsenic with other atoms in the As binding site number 2 of Structure Determination of A Self-Assembling Dna Crystal within 5.0Å range: probe atom residue distance (Å) B Occ D:As101 b:0.4 occ:0.43 N7 D:DG10 4.2 0.2 1.0 O6 D:DG10 4.5 0.0 1.0 O6 D:DG11 4.8 0.5 1.0 C5 D:DG10 5.0 95.2 1.0

C.R.Simmons, F.Zhang, J.J.Birktoft, X.Qi, D.Han, Y.Liu, R.Sha, H.O.Abdallah, C.Hernandez, Y.P.Ohayon, N.C.Seeman, H.Yan. Construction and Structure Determination of A Three-Dimensional Dna Crystal. J.Am.Chem.Soc. V. 138 10047 2016.
ISSN: ESSN 1520-5126
PubMed: 27447429
DOI: 10.1021/JACS.6B06508