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Arsenic in PDB 5nt5: The Effect of Berenil and Cacodylateon the Crystal Structure of D(Cgtgaattcacg)

Protein crystallography data

The structure of The Effect of Berenil and Cacodylateon the Crystal Structure of D(Cgtgaattcacg), PDB code: 5nt5 was solved by H.I.Sbirkova, B.L.Shivachev, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.98 / 2.30
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 25.044, 41.534, 64.868, 90.00, 90.00, 90.00
R / Rfree (%) 24.5 / 31.2

Other elements in 5nt5:

The structure of The Effect of Berenil and Cacodylateon the Crystal Structure of D(Cgtgaattcacg) also contains other interesting chemical elements:

Sodium (Na) 1 atom

Arsenic Binding Sites:

The binding sites of Arsenic atom in the The Effect of Berenil and Cacodylateon the Crystal Structure of D(Cgtgaattcacg) (pdb code 5nt5). This binding sites where shown within 5.0 Angstroms radius around Arsenic atom.
In total only one binding site of Arsenic was determined in the The Effect of Berenil and Cacodylateon the Crystal Structure of D(Cgtgaattcacg), PDB code: 5nt5:

Arsenic binding site 1 out of 1 in 5nt5

Go back to Arsenic Binding Sites List in 5nt5
Arsenic binding site 1 out of 1 in the The Effect of Berenil and Cacodylateon the Crystal Structure of D(Cgtgaattcacg)


Mono view


Stereo pair view

A full contact list of Arsenic with other atoms in the As binding site number 1 of The Effect of Berenil and Cacodylateon the Crystal Structure of D(Cgtgaattcacg) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:As101

b:0.5
occ:1.00
AS A:CAC101 0.0 0.5 1.0
O1 A:CAC101 1.7 0.4 1.0
O2 A:CAC101 1.8 0.7 1.0
C2 A:CAC101 1.9 0.3 1.0
C1 A:CAC101 2.0 0.8 1.0
N7 A:DG2 4.0 27.7 1.0
C5 A:DC1 4.1 28.3 1.0
C6 A:DC1 4.2 28.6 1.0
O6 A:DG2 4.4 27.4 1.0
O4 A:DT3 4.7 33.5 1.0
C4 A:DC1 4.9 30.2 1.0
C5 A:DG2 4.9 26.6 1.0
N6 B:DA22 4.9 37.1 1.0
C8 A:DG2 4.9 28.4 1.0

Reference:

H.I.Sbirkova, B.L.Shivachev. The Effect of Berenil and Cacodylateon the Crystal Structure of D(Cgtgaattcacg) To Be Published.
Page generated: Wed Jul 10 12:55:04 2024

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