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Atomistry » Arsenic » PDB 5yvb-6i5n » 6fmi | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Atomistry » Arsenic » PDB 5yvb-6i5n » 6fmi » |
Arsenic in PDB 6fmi: Pvhl:Elob:Eloc in Complex with N-((S)-1-((2S,4R)-4-Hydroxy-2-((4-(4- Methylthiazol-5-Yl)Benzyl)Carbamothioyl) Pyrrolidin-1-Yl)-1- Oxopropan-2-Yl)Acetamide (Ligand 2)Protein crystallography data
The structure of Pvhl:Elob:Eloc in Complex with N-((S)-1-((2S,4R)-4-Hydroxy-2-((4-(4- Methylthiazol-5-Yl)Benzyl)Carbamothioyl) Pyrrolidin-1-Yl)-1- Oxopropan-2-Yl)Acetamide (Ligand 2), PDB code: 6fmi
was solved by
P.Soares,
X.Lucas,
A.Ciulli,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Arsenic Binding Sites:
The binding sites of Arsenic atom in the Pvhl:Elob:Eloc in Complex with N-((S)-1-((2S,4R)-4-Hydroxy-2-((4-(4- Methylthiazol-5-Yl)Benzyl)Carbamothioyl) Pyrrolidin-1-Yl)-1- Oxopropan-2-Yl)Acetamide (Ligand 2)
(pdb code 6fmi). This binding sites where shown within
5.0 Angstroms radius around Arsenic atom.
In total 6 binding sites of Arsenic where determined in the Pvhl:Elob:Eloc in Complex with N-((S)-1-((2S,4R)-4-Hydroxy-2-((4-(4- Methylthiazol-5-Yl)Benzyl)Carbamothioyl) Pyrrolidin-1-Yl)-1- Oxopropan-2-Yl)Acetamide (Ligand 2), PDB code: 6fmi: Jump to Arsenic binding site number: 1; 2; 3; 4; 5; 6; Arsenic binding site 1 out of 6 in 6fmiGo back to Arsenic Binding Sites List in 6fmi
Arsenic binding site 1 out
of 6 in the Pvhl:Elob:Eloc in Complex with N-((S)-1-((2S,4R)-4-Hydroxy-2-((4-(4- Methylthiazol-5-Yl)Benzyl)Carbamothioyl) Pyrrolidin-1-Yl)-1- Oxopropan-2-Yl)Acetamide (Ligand 2)
Mono view Stereo pair view
Arsenic binding site 2 out of 6 in 6fmiGo back to Arsenic Binding Sites List in 6fmi
Arsenic binding site 2 out
of 6 in the Pvhl:Elob:Eloc in Complex with N-((S)-1-((2S,4R)-4-Hydroxy-2-((4-(4- Methylthiazol-5-Yl)Benzyl)Carbamothioyl) Pyrrolidin-1-Yl)-1- Oxopropan-2-Yl)Acetamide (Ligand 2)
Mono view Stereo pair view
Arsenic binding site 3 out of 6 in 6fmiGo back to Arsenic Binding Sites List in 6fmi
Arsenic binding site 3 out
of 6 in the Pvhl:Elob:Eloc in Complex with N-((S)-1-((2S,4R)-4-Hydroxy-2-((4-(4- Methylthiazol-5-Yl)Benzyl)Carbamothioyl) Pyrrolidin-1-Yl)-1- Oxopropan-2-Yl)Acetamide (Ligand 2)
Mono view Stereo pair view
Arsenic binding site 4 out of 6 in 6fmiGo back to Arsenic Binding Sites List in 6fmi
Arsenic binding site 4 out
of 6 in the Pvhl:Elob:Eloc in Complex with N-((S)-1-((2S,4R)-4-Hydroxy-2-((4-(4- Methylthiazol-5-Yl)Benzyl)Carbamothioyl) Pyrrolidin-1-Yl)-1- Oxopropan-2-Yl)Acetamide (Ligand 2)
Mono view Stereo pair view
Arsenic binding site 5 out of 6 in 6fmiGo back to Arsenic Binding Sites List in 6fmi
Arsenic binding site 5 out
of 6 in the Pvhl:Elob:Eloc in Complex with N-((S)-1-((2S,4R)-4-Hydroxy-2-((4-(4- Methylthiazol-5-Yl)Benzyl)Carbamothioyl) Pyrrolidin-1-Yl)-1- Oxopropan-2-Yl)Acetamide (Ligand 2)
Mono view Stereo pair view
Arsenic binding site 6 out of 6 in 6fmiGo back to Arsenic Binding Sites List in 6fmi
Arsenic binding site 6 out
of 6 in the Pvhl:Elob:Eloc in Complex with N-((S)-1-((2S,4R)-4-Hydroxy-2-((4-(4- Methylthiazol-5-Yl)Benzyl)Carbamothioyl) Pyrrolidin-1-Yl)-1- Oxopropan-2-Yl)Acetamide (Ligand 2)
Mono view Stereo pair view
Reference:
P.Soares,
X.Lucas,
A.Ciulli.
Thioamide Substitution to Probe the Hydroxyproline Recognition of Vhl Ligands. Bioorg. Med. Chem. V. 26 2992 2018.
Page generated: Wed Jul 10 13:17:14 2024
ISSN: ESSN 1464-3391 PubMed: 29650462 DOI: 10.1016/J.BMC.2018.03.034 |
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