Atomistry » Arsenic » PDB 6j05-6wrb » 6u40
Atomistry »
  Arsenic »
    PDB 6j05-6wrb »
      6u40 »

Arsenic in PDB 6u40: Crystal Structure of A Self-Assembling Dna Crystal Scaffold with Rhombohedral Symmetry

Protein crystallography data

The structure of Crystal Structure of A Self-Assembling Dna Crystal Scaffold with Rhombohedral Symmetry, PDB code: 6u40 was solved by C.R.Simmons, T.Macculloch, N.Stephanopoulos, H.Yan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 33.36 / 2.70
Space group H 3
Cell size a, b, c (Å), α, β, γ (°) 115.556, 115.556, 44.638, 90.00, 90.00, 120.00
R / Rfree (%) 23.9 / 25.5

Arsenic Binding Sites:

The binding sites of Arsenic atom in the Crystal Structure of A Self-Assembling Dna Crystal Scaffold with Rhombohedral Symmetry (pdb code 6u40). This binding sites where shown within 5.0 Angstroms radius around Arsenic atom.
In total 2 binding sites of Arsenic where determined in the Crystal Structure of A Self-Assembling Dna Crystal Scaffold with Rhombohedral Symmetry, PDB code: 6u40:
Jump to Arsenic binding site number: 1; 2;

Arsenic binding site 1 out of 2 in 6u40

Go back to Arsenic Binding Sites List in 6u40
Arsenic binding site 1 out of 2 in the Crystal Structure of A Self-Assembling Dna Crystal Scaffold with Rhombohedral Symmetry


Mono view


Stereo pair view

A full contact list of Arsenic with other atoms in the As binding site number 1 of Crystal Structure of A Self-Assembling Dna Crystal Scaffold with Rhombohedral Symmetry within 5.0Å range:
probe atom residue distance (Å) B Occ
A:As101

b:0.5
occ:1.00
OP1 A:DA65 4.1 69.7 1.0
N7 A:DG66 4.4 63.8 1.0
O6 A:DG66 4.5 54.4 1.0
P A:DA65 4.6 93.3 1.0
N7 A:DA65 4.6 52.5 1.0
H41 A:DC67 4.6 69.2 1.0

Arsenic binding site 2 out of 2 in 6u40

Go back to Arsenic Binding Sites List in 6u40
Arsenic binding site 2 out of 2 in the Crystal Structure of A Self-Assembling Dna Crystal Scaffold with Rhombohedral Symmetry


Mono view


Stereo pair view

A full contact list of Arsenic with other atoms in the As binding site number 2 of Crystal Structure of A Self-Assembling Dna Crystal Scaffold with Rhombohedral Symmetry within 5.0Å range:
probe atom residue distance (Å) B Occ
D:As101

b:0.7
occ:1.00
N7 D:DG72 4.0 57.9 1.0
O6 D:DG72 4.0 62.9 1.0
C5 D:DG72 4.7 47.8 1.0
C6 D:DG72 4.7 54.1 1.0
H71 D:DT73 4.9 74.2 1.0
H62 B:DA10 4.9 78.1 1.0
O4 D:DT73 5.0 55.7 1.0
C8 D:DG72 5.0 55.4 1.0

Reference:

C.R.Simmons, T.Macculloch, N.Stephanopoulos, H.Yan. Crystal Structure of A Self-Assembling Dna Crystal Scaffold with Rhombohedral Symmetry To Be Published.
Page generated: Wed Jul 10 13:30:09 2024

Last articles

Zn in 7Z15
Zn in 7YZZ
Zn in 7Z10
Zn in 7Z0U
Zn in 7YUI
Zn in 7Z0R
Zn in 7Z00
Zn in 7Z0I
Zn in 7YX8
Zn in 7YXM
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy