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Arsenic in PDB 7jhb: Self-Assembly of A 3D Dna Crystal Lattice (4X6 Junction Version) Containing the J24 Immobile Holliday Junction

Protein crystallography data

The structure of Self-Assembly of A 3D Dna Crystal Lattice (4X6 Junction Version) Containing the J24 Immobile Holliday Junction, PDB code: 7jhb was solved by C.R.Simmons, T.Macculloch, N.Stephanopoulos, H.Yan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.05 / 3.11
Space group P 32
Cell size a, b, c (Å), α, β, γ (°) 68.104, 68.104, 57.304, 90, 90, 120
R / Rfree (%) 27.1 / 29.8

Arsenic Binding Sites:

The binding sites of Arsenic atom in the Self-Assembly of A 3D Dna Crystal Lattice (4X6 Junction Version) Containing the J24 Immobile Holliday Junction (pdb code 7jhb). This binding sites where shown within 5.0 Angstroms radius around Arsenic atom.
In total 2 binding sites of Arsenic where determined in the Self-Assembly of A 3D Dna Crystal Lattice (4X6 Junction Version) Containing the J24 Immobile Holliday Junction, PDB code: 7jhb:
Jump to Arsenic binding site number: 1; 2;

Arsenic binding site 1 out of 2 in 7jhb

Go back to Arsenic Binding Sites List in 7jhb
Arsenic binding site 1 out of 2 in the Self-Assembly of A 3D Dna Crystal Lattice (4X6 Junction Version) Containing the J24 Immobile Holliday Junction


Mono view


Stereo pair view

A full contact list of Arsenic with other atoms in the As binding site number 1 of Self-Assembly of A 3D Dna Crystal Lattice (4X6 Junction Version) Containing the J24 Immobile Holliday Junction within 5.0Å range:
probe atom residue distance (Å) B Occ
A:As101

b:195.6
occ:1.00
C5 A:DC8 4.1 112.5 1.0
N4 A:DC8 4.1 94.7 1.0
C4 A:DC8 4.6 109.6 1.0

Arsenic binding site 2 out of 2 in 7jhb

Go back to Arsenic Binding Sites List in 7jhb
Arsenic binding site 2 out of 2 in the Self-Assembly of A 3D Dna Crystal Lattice (4X6 Junction Version) Containing the J24 Immobile Holliday Junction


Mono view


Stereo pair view

A full contact list of Arsenic with other atoms in the As binding site number 2 of Self-Assembly of A 3D Dna Crystal Lattice (4X6 Junction Version) Containing the J24 Immobile Holliday Junction within 5.0Å range:
probe atom residue distance (Å) B Occ
B:As101

b:107.8
occ:1.00
N4 B:DC12 4.4 88.1 1.0

Reference:

C.R.Simmons, T.Macculloch, N.Stephanopoulos, H.Yan. Structural and Computational Based Approach For the Creation of A Toolbox of Immobile Holliday Junctions For Dna-Directed Self-Assembly To Be Published.
Page generated: Mon Jul 7 00:57:06 2025

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