Arsenic in PDB 7jog: Self-Assembly of A 3D Dna Crystal Lattice (4X6 Duplex Version) Containing the J33 Immobile Holliday Junction

The structure of Self-Assembly of A 3D Dna Crystal Lattice (4X6 Duplex Version) Containing the J33 Immobile Holliday Junction, PDB code: 7jog was solved by C.R.Simmons, T.Macculloch, N.Stephanopoulos, H.Yan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	34.20 / 3.10
Space group	P 32
Cell size a, b, c (Å), α, β, γ (°)	68.389, 68.389, 60.348, 90, 90, 120
R / Rfree (%)	23.6 / 27.3

The binding sites of Arsenic atom in the Self-Assembly of A 3D Dna Crystal Lattice (4X6 Duplex Version) Containing the J33 Immobile Holliday Junction (pdb code 7jog). This binding sites where shown within 5.0 Angstroms radius around Arsenic atom.
In total only one binding site of Arsenic was determined in the Self-Assembly of A 3D Dna Crystal Lattice (4X6 Duplex Version) Containing the J33 Immobile Holliday Junction, PDB code: 7jog:

Arsenic binding site 1 out of 1 in the Self-Assembly of A 3D Dna Crystal Lattice (4X6 Duplex Version) Containing the J33 Immobile Holliday Junction


Mono view


Stereo pair view

A full contact list of Arsenic with other atoms in the As binding site number 1 of Self-Assembly of A 3D Dna Crystal Lattice (4X6 Duplex Version) Containing the J33 Immobile Holliday Junction within 5.0Å range: probe atom residue distance (Å) B Occ D:As101 b:130.0 occ:1.00 N7 D:DG11 3.2 77.5 1.0 O6 D:DG11 3.6 85.7 1.0 OP1 D:DA10 3.8 110.3 1.0 C5 D:DG11 4.0 74.2 1.0 P D:DA10 4.1 99.9 1.0 C6 D:DG11 4.2 84.5 1.0 C8 D:DG11 4.3 81.4 1.0 OP2 D:DA10 4.4 73.8 1.0 H8 D:DG11 4.5 97.7 1.0 H73 D:DT12 4.6 100.1 1.0 N7 D:DA10 4.7 66.7 1.0 H8 D:DA10 4.9 86.1 1.0 C8 D:DA10 5.0 71.7 1.0

C.R.Simmons, T.Macculloch, N.Stephanopoulos, H.Yan. Structural and Computational Based Approach For the Creation of A Toolbox of Immobile Holliday Junctions For Dna-Directed Self-Assembly To Be Published.