Atomistry » Arsenic » PDB 8cql-9nse » 8e5r
Atomistry »
  Arsenic »
    PDB 8cql-9nse »
      8e5r »

Arsenic in PDB 8e5r: Schistosoma Mansoni (Blood Fluke) Sulfotransferase/Cidd-0150610 Complex

Protein crystallography data

The structure of Schistosoma Mansoni (Blood Fluke) Sulfotransferase/Cidd-0150610 Complex, PDB code: 8e5r was solved by A.B.Taylor, S.N.Alwan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 53.84 / 1.40
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 140.889, 39.668, 53.839, 90, 90, 90
R / Rfree (%) 16.9 / 19.9

Other elements in 8e5r:

The structure of Schistosoma Mansoni (Blood Fluke) Sulfotransferase/Cidd-0150610 Complex also contains other interesting chemical elements:

Fluorine (F) 3 atoms

Arsenic Binding Sites:

The binding sites of Arsenic atom in the Schistosoma Mansoni (Blood Fluke) Sulfotransferase/Cidd-0150610 Complex (pdb code 8e5r). This binding sites where shown within 5.0 Angstroms radius around Arsenic atom.
In total 2 binding sites of Arsenic where determined in the Schistosoma Mansoni (Blood Fluke) Sulfotransferase/Cidd-0150610 Complex, PDB code: 8e5r:
Jump to Arsenic binding site number: 1; 2;

Arsenic binding site 1 out of 2 in 8e5r

Go back to Arsenic Binding Sites List in 8e5r
Arsenic binding site 1 out of 2 in the Schistosoma Mansoni (Blood Fluke) Sulfotransferase/Cidd-0150610 Complex


Mono view


Stereo pair view

A full contact list of Arsenic with other atoms in the As binding site number 1 of Schistosoma Mansoni (Blood Fluke) Sulfotransferase/Cidd-0150610 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:As226

b:40.1
occ:0.61
AS A:CAS226 0.0 40.1 0.6
CE1 A:CAS226 2.0 46.6 0.6
CE2 A:CAS226 2.0 46.2 0.6
SG A:CAS226 2.3 35.8 0.6
SG A:CAS226 2.6 42.6 0.4
O A:CAS226 3.2 31.5 0.4
CB A:CAS226 3.3 29.9 0.6
CB A:CAS226 3.3 35.2 0.4
O A:CAS226 3.4 30.5 0.6
CE2 A:CAS226 3.5 55.1 0.4
C A:CAS226 3.7 28.2 0.4
AS A:CAS226 3.7 53.1 0.4
C A:CAS226 3.7 26.7 0.6
CA A:CAS226 4.1 30.7 0.4
CA A:CAS226 4.1 28.6 0.6
N A:VAL227 4.4 25.7 1.0
CE1 A:CAS226 4.9 53.9 0.4
CA A:VAL227 5.0 25.9 1.0

Arsenic binding site 2 out of 2 in 8e5r

Go back to Arsenic Binding Sites List in 8e5r
Arsenic binding site 2 out of 2 in the Schistosoma Mansoni (Blood Fluke) Sulfotransferase/Cidd-0150610 Complex


Mono view


Stereo pair view

A full contact list of Arsenic with other atoms in the As binding site number 2 of Schistosoma Mansoni (Blood Fluke) Sulfotransferase/Cidd-0150610 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:As226

b:53.1
occ:0.39
AS A:CAS226 0.0 53.1 0.4
CE1 A:CAS226 2.0 53.9 0.4
CE2 A:CAS226 2.0 55.1 0.4
SG A:CAS226 2.3 42.6 0.4
SG A:CAS226 2.6 35.8 0.6
CB A:CAS226 3.4 35.2 0.4
CB A:CAS226 3.4 29.9 0.6
O A:HOH602 3.5 41.4 1.0
AS A:CAS226 3.7 40.1 0.6
CE2 A:CAS226 3.8 46.2 0.6
N1 A:A3P402 4.0 29.1 1.0
C6 A:A3P402 4.3 28.9 1.0
N6 A:A3P402 4.5 30.8 1.0
C2 A:A3P402 4.5 28.4 1.0
CA A:CAS226 4.7 30.7 0.4
CA A:CAS226 4.8 28.6 0.6

Reference:

S.N.Alwan, A.B.Taylor, J.Rhodes, M.Tidwell, S.F.Mchardy, P.T.Loverde. Oxamniquine Derivatives Overcome Praziquantel Treatment Limitations For Schistosomiasis. Plos Pathog. V. 19 11018 2023.
ISSN: ESSN 1553-7374
PubMed: 37428793
DOI: 10.1371/JOURNAL.PPAT.1011018
Page generated: Thu Dec 28 00:56:11 2023

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy