Arsenic in PDB 8egw: Complex of FAT4(EC1-4) Bound to DCHS1(EC1-3)

Protein crystallography data

The structure of Complex of FAT4(EC1-4) Bound to DCHS1(EC1-3), PDB code: 8egw was solved by E.Medina, V.C.Luca, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.08 / 2.30
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 88.66, 61.37, 100.966, 90, 112.74, 90
R / Rfree (%) 19 / 23.5

Other elements in 8egw:

The structure of Complex of FAT4(EC1-4) Bound to DCHS1(EC1-3) also contains other interesting chemical elements:

Calcium (Ca) 19 atoms

Arsenic Binding Sites:

The binding sites of Arsenic atom in the Complex of FAT4(EC1-4) Bound to DCHS1(EC1-3) (pdb code 8egw). This binding sites where shown within 5.0 Angstroms radius around Arsenic atom.
In total 3 binding sites of Arsenic where determined in the Complex of FAT4(EC1-4) Bound to DCHS1(EC1-3), PDB code: 8egw:
Jump to Arsenic binding site number: 1; 2; 3;

Arsenic binding site 1 out of 3 in 8egw

Go back to Arsenic Binding Sites List in 8egw
Arsenic binding site 1 out of 3 in the Complex of FAT4(EC1-4) Bound to DCHS1(EC1-3)


Mono view


Stereo pair view

A full contact list of Arsenic with other atoms in the As binding site number 1 of Complex of FAT4(EC1-4) Bound to DCHS1(EC1-3) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:As410

b:189.0
occ:1.00
AS A:CAC410 0.0 189.0 1.0
O1 A:CAC410 1.7 190.0 1.0
O2 A:CAC410 1.7 187.7 1.0
C2 A:CAC410 2.0 183.3 1.0
C1 A:CAC410 2.0 185.6 1.0
O A:HOH556 3.7 63.4 1.0
NE2 B:GLN153 3.9 78.7 1.0
O A:SER345 4.0 41.2 1.0
O A:HOH515 4.4 68.6 1.0
CB A:SER258 4.7 54.7 1.0
CE2 A:PHE347 4.8 36.9 1.0
OG A:SER345 4.8 64.0 1.0
O A:SER258 4.8 52.8 1.0
C A:SER345 4.9 40.2 1.0
O A:HOH552 4.9 42.4 1.0
CD B:GLN153 5.0 75.2 1.0

Arsenic binding site 2 out of 3 in 8egw

Go back to Arsenic Binding Sites List in 8egw
Arsenic binding site 2 out of 3 in the Complex of FAT4(EC1-4) Bound to DCHS1(EC1-3)


Mono view


Stereo pair view

A full contact list of Arsenic with other atoms in the As binding site number 2 of Complex of FAT4(EC1-4) Bound to DCHS1(EC1-3) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:As412

b:196.7
occ:1.00
AS A:CAC412 0.0 196.7 1.0
O1 A:CAC412 1.7 195.5 1.0
O2 A:CAC412 1.7 195.3 1.0
C1 A:CAC412 2.0 198.8 1.0
C2 A:CAC412 2.0 194.0 1.0
OE1 A:GLU317 3.1 84.5 1.0
CD A:GLU317 4.1 76.4 1.0
OE2 A:GLU317 4.4 77.3 1.0
O A:HOH567 4.8 65.9 1.0
OE1 A:GLN315 4.9 61.4 1.0

Arsenic binding site 3 out of 3 in 8egw

Go back to Arsenic Binding Sites List in 8egw
Arsenic binding site 3 out of 3 in the Complex of FAT4(EC1-4) Bound to DCHS1(EC1-3)


Mono view


Stereo pair view

A full contact list of Arsenic with other atoms in the As binding site number 3 of Complex of FAT4(EC1-4) Bound to DCHS1(EC1-3) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:As414

b:197.9
occ:1.00
AS A:CAC414 0.0 197.9 1.0
O2 A:CAC414 1.7 196.5 1.0
O1 A:CAC414 1.7 195.3 1.0
C2 A:CAC414 2.0 192.3 1.0
C1 A:CAC414 2.0 195.0 1.0
OE1 A:GLN178 4.2 70.5 1.0
O A:GLY201 4.3 93.3 1.0
O A:GLY173 4.4 70.6 1.0
C A:GLY173 4.6 64.4 1.0
C A:GLY201 4.7 105.5 1.0
O A:ASP200 4.8 130.9 1.0
CA A:GLY173 4.8 54.9 1.0
NE2 A:GLN178 4.8 56.1 1.0
CD A:GLN178 4.9 69.3 1.0

Reference:

E.Medina, Y.Easa, D.Sprinzak, V.C.Luca. Structural Basis For Interactions Between the Planar Cell Polarity Cadherins FAT4 and DACHSOUS1 To Be Published.
Page generated: Tue Apr 4 17:14:40 2023

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy