Arsenic in PDB 3i7d: Crystal Structure of Sugar Phosphate Isomerase From A Cupin Superfamily SPO2919 From Silicibacter Pomeroyi (YP_168127.1) From Silicibacter Pomeroyi Dss-3 at 2.30 A Resolution

The structure of Crystal Structure of Sugar Phosphate Isomerase From A Cupin Superfamily SPO2919 From Silicibacter Pomeroyi (YP_168127.1) From Silicibacter Pomeroyi Dss-3 at 2.30 A Resolution, PDB code: 3i7d was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	29.76 / 2.30
Space group	P 41 21 2
Cell size a, b, c (Å), α, β, γ (°)	52.815, 52.815, 252.163, 90.00, 90.00, 90.00
R / Rfree (%)	19.6 / 24.5

The structure of Crystal Structure of Sugar Phosphate Isomerase From A Cupin Superfamily SPO2919 From Silicibacter Pomeroyi (YP_168127.1) From Silicibacter Pomeroyi Dss-3 at 2.30 A Resolution also contains other interesting chemical elements:

Chlorine

(Cl)

1 atom

The binding sites of Arsenic atom in the Crystal Structure of Sugar Phosphate Isomerase From A Cupin Superfamily SPO2919 From Silicibacter Pomeroyi (YP_168127.1) From Silicibacter Pomeroyi Dss-3 at 2.30 A Resolution (pdb code 3i7d). This binding sites where shown within 5.0 Angstroms radius around Arsenic atom.
In total 2 binding sites of Arsenic where determined in the Crystal Structure of Sugar Phosphate Isomerase From A Cupin Superfamily SPO2919 From Silicibacter Pomeroyi (YP_168127.1) From Silicibacter Pomeroyi Dss-3 at 2.30 A Resolution, PDB code: 3i7d:
Jump to Arsenic binding site number: 1; 2;

Arsenic binding site 1 out of 2 in the Crystal Structure of Sugar Phosphate Isomerase From A Cupin Superfamily SPO2919 From Silicibacter Pomeroyi (YP_168127.1) From Silicibacter Pomeroyi Dss-3 at 2.30 A Resolution


Mono view


Stereo pair view

A full contact list of Arsenic with other atoms in the As binding site number 1 of Crystal Structure of Sugar Phosphate Isomerase From A Cupin Superfamily SPO2919 From Silicibacter Pomeroyi (YP_168127.1) From Silicibacter Pomeroyi Dss-3 at 2.30 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:As164 b:90.7 occ:1.00 AS A:CAC164 0.0 90.7 1.0 O2 A:CAC164 1.7 86.6 1.0 O1 A:CAC164 1.8 88.1 1.0 C1 A:CAC164 2.0 89.2 1.0 C2 A:CAC164 2.0 87.3 1.0 OH A:TYR128 3.5 22.9 1.0 O A:HOH184 3.6 33.0 1.0 OH A:TYR17 3.6 31.8 1.0 O A:HOH181 4.0 40.8 1.0 NE2 A:HIS59 4.4 30.2 1.0 CZ A:TYR17 4.4 30.7 1.0 CE1 A:HIS59 4.4 33.3 1.0 CZ A:TYR128 4.5 25.1 1.0 CE1 A:TYR17 4.6 29.1 1.0 CD2 A:HIS59 4.6 30.5 1.0 O A:HOH182 4.7 24.0 1.0 CE1 A:TYR128 4.7 26.6 1.0 ND1 A:HIS59 4.7 32.3 1.0 CB A:SER56 4.8 28.9 1.0 CG A:HIS59 4.8 29.1 1.0

Arsenic binding site 2 out of 2 in the Crystal Structure of Sugar Phosphate Isomerase From A Cupin Superfamily SPO2919 From Silicibacter Pomeroyi (YP_168127.1) From Silicibacter Pomeroyi Dss-3 at 2.30 A Resolution


Mono view


Stereo pair view

A full contact list of Arsenic with other atoms in the As binding site number 2 of Crystal Structure of Sugar Phosphate Isomerase From A Cupin Superfamily SPO2919 From Silicibacter Pomeroyi (YP_168127.1) From Silicibacter Pomeroyi Dss-3 at 2.30 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ B:As163 b:37.3 occ:1.00 AS B:CAC163 0.0 37.3 1.0 O1 B:CAC163 1.7 37.3 1.0 O2 B:CAC163 1.8 27.5 1.0 C1 B:CAC163 2.0 36.9 1.0 C2 B:CAC163 2.0 31.3 1.0 OH B:TYR128 3.2 24.0 1.0 O B:HOH188 3.5 17.2 1.0 OH B:TYR17 3.7 26.2 1.0 O B:HOH239 4.2 27.0 1.0 CZ B:TYR17 4.3 30.3 1.0 CZ B:TYR128 4.4 25.9 1.0 CE1 B:TYR17 4.5 28.8 1.0 NE2 B:HIS59 4.5 28.0 1.0 CE1 B:HIS59 4.6 31.4 1.0 CE1 B:TYR128 4.7 23.6 1.0 CD2 B:HIS59 4.8 28.6 1.0 ND1 B:HIS59 4.9 30.3 1.0 O B:HOH238 5.0 35.3 1.0 CG B:HIS59 5.0 27.5 1.0

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.