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Arsenic in PDB 5xrs: Crystal Structure of A/Minnesota/11/2010 (H3N2) Influenza Virus Hemagglutinin in Complex with Lstc

Protein crystallography data

The structure of Crystal Structure of A/Minnesota/11/2010 (H3N2) Influenza Virus Hemagglutinin in Complex with Lstc, PDB code: 5xrs was solved by H.Zhang, I.A.Wilson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.32 / 2.91
Space group I 21 3
Cell size a, b, c (Å), α, β, γ (°) 292.980, 292.980, 292.980, 90.00, 90.00, 90.00
R / Rfree (%) 18.7 / 22.5

Arsenic Binding Sites:

The binding sites of Arsenic atom in the Crystal Structure of A/Minnesota/11/2010 (H3N2) Influenza Virus Hemagglutinin in Complex with Lstc (pdb code 5xrs). This binding sites where shown within 5.0 Angstroms radius around Arsenic atom.
In total only one binding site of Arsenic was determined in the Crystal Structure of A/Minnesota/11/2010 (H3N2) Influenza Virus Hemagglutinin in Complex with Lstc, PDB code: 5xrs:

Arsenic binding site 1 out of 1 in 5xrs

Go back to Arsenic Binding Sites List in 5xrs
Arsenic binding site 1 out of 1 in the Crystal Structure of A/Minnesota/11/2010 (H3N2) Influenza Virus Hemagglutinin in Complex with Lstc


Mono view


Stereo pair view

A full contact list of Arsenic with other atoms in the As binding site number 1 of Crystal Structure of A/Minnesota/11/2010 (H3N2) Influenza Virus Hemagglutinin in Complex with Lstc within 5.0Å range:
probe atom residue distance (Å) B Occ
D:As201

b:1.0
occ:1.00
AS D:CAC201 0.0 1.0 1.0
O1 D:CAC201 1.7 0.4 1.0
O2 D:CAC201 1.7 0.8 1.0
C2 D:CAC201 1.9 0.2 1.0
C1 D:CAC201 2.0 0.8 1.0
OE2 B:GLU128 3.5 0.6 1.0
OE2 D:GLU128 3.9 0.7 1.0
OE1 D:GLU128 4.0 0.0 1.0
OE1 F:GLU128 4.1 0.9 1.0
CD D:GLU128 4.3 0.4 1.0
CD B:GLU128 4.5 0.3 1.0
OE2 F:GLU128 4.6 1.0 1.0
NH2 F:ARG170 4.6 91.8 1.0
OE1 B:GLU128 4.8 1.0 1.0
CD F:GLU128 4.8 0.4 1.0
NH2 D:ARG170 4.8 71.3 1.0
NH2 B:ARG170 5.0 65.1 1.0

Reference:

S.Bangaru, H.Zhang, I.M.Gilchuk, T.G.Voss, R.P.Irving, P.Gilchuk, P.Matta, X.Zhu, S.Lang, T.Nieusma, J.A.Richt, R.A.Albrecht, H.A.Vanderven, R.Bombardi, S.J.Kent, A.B.Ward, I.A.Wilson, J.E.Crowe. A Multifunctional Human Monoclonal Neutralizing Antibody That Targets A Unique Conserved Epitope on Influenza Ha. Nat Commun V. 9 2669 2018.
ISSN: ESSN 2041-1723
PubMed: 29991715
DOI: 10.1038/S41467-018-04704-9
Page generated: Mon Jul 7 00:32:35 2025

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