Arsenic in PDB 6wr3: Self-Assembly of A 3D Dna Crystal Lattice (4X5 Duplex Version) Containing the J36 Immobile Holliday Junction

The structure of Self-Assembly of A 3D Dna Crystal Lattice (4X5 Duplex Version) Containing the J36 Immobile Holliday Junction, PDB code: 6wr3 was solved by C.R.Simmons, T.Macculloch, N.Stephanopoulos, H.Yan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	34.41 / 3.17
Space group	P 32
Cell size a, b, c (Å), α, β, γ (°)	68.816, 68.816, 60.564, 90, 90, 120
R / Rfree (%)	24.8 / 25.5

The binding sites of Arsenic atom in the Self-Assembly of A 3D Dna Crystal Lattice (4X5 Duplex Version) Containing the J36 Immobile Holliday Junction (pdb code 6wr3). This binding sites where shown within 5.0 Angstroms radius around Arsenic atom.
In total 3 binding sites of Arsenic where determined in the Self-Assembly of A 3D Dna Crystal Lattice (4X5 Duplex Version) Containing the J36 Immobile Holliday Junction, PDB code: 6wr3:
Jump to Arsenic binding site number: 1; 2; 3;

Arsenic binding site 1 out of 3 in the Self-Assembly of A 3D Dna Crystal Lattice (4X5 Duplex Version) Containing the J36 Immobile Holliday Junction


Mono view


Stereo pair view

A full contact list of Arsenic with other atoms in the As binding site number 1 of Self-Assembly of A 3D Dna Crystal Lattice (4X5 Duplex Version) Containing the J36 Immobile Holliday Junction within 5.0Å range: probe atom residue distance (Å) B Occ B:As101 b:212.5 occ:1.00 O4 B:DT3 4.3 108.7 1.0 O6 B:DG2 4.4 94.2 1.0 N7 B:DG2 4.5 94.5 1.0 N6 A:DA12 5.0 106.4 1.0

Arsenic binding site 2 out of 3 in the Self-Assembly of A 3D Dna Crystal Lattice (4X5 Duplex Version) Containing the J36 Immobile Holliday Junction


Mono view


Stereo pair view

A full contact list of Arsenic with other atoms in the As binding site number 2 of Self-Assembly of A 3D Dna Crystal Lattice (4X5 Duplex Version) Containing the J36 Immobile Holliday Junction within 5.0Å range: probe atom residue distance (Å) B Occ C:As101 b:187.4 occ:1.00 N7 C:DG9 4.4 80.3 1.0 N7 C:DG8 4.5 87.7 1.0 O6 C:DG9 4.6 65.1 1.0 OP2 C:DG8 4.6 113.1 1.0 C8 C:DG8 4.7 80.8 1.0

Arsenic binding site 3 out of 3 in the Self-Assembly of A 3D Dna Crystal Lattice (4X5 Duplex Version) Containing the J36 Immobile Holliday Junction


Mono view


Stereo pair view

A full contact list of Arsenic with other atoms in the As binding site number 3 of Self-Assembly of A 3D Dna Crystal Lattice (4X5 Duplex Version) Containing the J36 Immobile Holliday Junction within 5.0Å range: probe atom residue distance (Å) B Occ D:As101 b:187.2 occ:1.00 O6 D:DG11 4.9 109.3 1.0 O4 D:DT12 4.9 111.0 1.0

C.R.Simmons, T.Macculloch, N.Stephanopoulos, H.Yan. Structural and Computational Based Approach For the Creation of A Toolbox of Immobile Holliday Junctions For Dna-Directed Self-Assembly To Be Published.