Arsenic in PDB 6wr5: Self-Assembly of A 3D Dna Crystal Lattice (4X5 Duplex Version) Containing the J35 Immobile Holliday Junction

The structure of Self-Assembly of A 3D Dna Crystal Lattice (4X5 Duplex Version) Containing the J35 Immobile Holliday Junction, PDB code: 6wr5 was solved by C.R.Simmons, T.Macculloch, N.Stephanopoulos, H.Yan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	34.34 / 3.06
Space group	P 32
Cell size a, b, c (Å), α, β, γ (°)	68.673, 68.673, 60.122, 90, 90, 120
R / Rfree (%)	25 / 26.4

The binding sites of Arsenic atom in the Self-Assembly of A 3D Dna Crystal Lattice (4X5 Duplex Version) Containing the J35 Immobile Holliday Junction (pdb code 6wr5). This binding sites where shown within 5.0 Angstroms radius around Arsenic atom.
In total 2 binding sites of Arsenic where determined in the Self-Assembly of A 3D Dna Crystal Lattice (4X5 Duplex Version) Containing the J35 Immobile Holliday Junction, PDB code: 6wr5:
Jump to Arsenic binding site number: 1; 2;

Arsenic binding site 1 out of 2 in the Self-Assembly of A 3D Dna Crystal Lattice (4X5 Duplex Version) Containing the J35 Immobile Holliday Junction


Mono view


Stereo pair view

A full contact list of Arsenic with other atoms in the As binding site number 1 of Self-Assembly of A 3D Dna Crystal Lattice (4X5 Duplex Version) Containing the J35 Immobile Holliday Junction within 5.0Å range: probe atom residue distance (Å) B Occ B:As101 b:143.6 occ:1.00 OP1 B:DA1 4.1 90.0 1.0 O6 B:DG2 4.4 81.0 1.0 N7 B:DG2 4.5 73.4 1.0 N7 B:DA1 4.6 69.5 1.0

Arsenic binding site 2 out of 2 in the Self-Assembly of A 3D Dna Crystal Lattice (4X5 Duplex Version) Containing the J35 Immobile Holliday Junction


Mono view


Stereo pair view

A full contact list of Arsenic with other atoms in the As binding site number 2 of Self-Assembly of A 3D Dna Crystal Lattice (4X5 Duplex Version) Containing the J35 Immobile Holliday Junction within 5.0Å range: probe atom residue distance (Å) B Occ C:As101 b:154.2 occ:1.00 N6 A:DA15 3.9 73.1 1.0 O6 C:DG8 4.1 81.1 1.0 N7 C:DG8 4.5 85.4 1.0 C2' C:DT7 4.6 88.2 1.0 N4 C:DC9 4.6 83.0 1.0 C6 C:DG8 5.0 80.5 1.0

C.R.Simmons, T.Macculloch, N.Stephanopoulos, H.Yan. Structural and Computational Based Approach For the Creation of A Toolbox of Immobile Holliday Junctions For Dna-Directed Self-Assembly To Be Published.